Insertion junction: CLIP2.000891_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000891
Chromosome:chromosome 5
Location:1020330
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g247400 RDP4 Putative rhodanese domain phosphatase; (1 of 25) PF00581 - Rhodanese-like domain (Rhodanese) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGACGTGGGTGGACCGCAGTTGCCGCGCAAGGGTGTTGCGACATTGT
Internal bar code:CGTGACGTTCCGTGTTGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1932
LEAP-Seq percent confirming:15.748
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:107
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGAAACGTTTCAAGCAG
Suggested primer 2:CACCACCACCTACATGGCAT