Insertion junction: CLIP2.000892_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000892
Chromosome:chromosome 9
Location:3177597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394473 LCI9 Low-CO2-inducible protein; (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTGCGGTTCTCGCACGGCTCCCAGATCTCAGCCTTGCCGCTCACGGC
Internal bar code:ATGTGATCGTCGAGATCGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTGCATTGTGGCTGATG
Suggested primer 2:GCCTCCTTCTTGGTGACCTC