Insertion junction: CLIP2.000893_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000893
Chromosome:chromosome 16
Location:641042
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691800 FLVB1,FLVB (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTAACCCCGCCTCCCTCCCCCGCTTCCCTCGCCTCCCGTCTCCCCCGC
Internal bar code:GTAGTTTGGCACATAGCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:37.5
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTACTATCCCCCTAGCCCCC
Suggested primer 2:GAGAACGGCACCACCTACAA