Insertion junction: CLIP2.000895_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000895
Chromosome:chromosome 9
Location:6518482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415700 CAH3 Carbonic anhydrase 3; (1 of 1) PTHR18952//PTHR18952:SF86 - CARBONIC ANHYDRASE // CARBONIC ANHYDRASE-LIKE PROTEIN 1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGACAGAGAGCGGGCGGAGTGCCCATGCATCGCATCGTAACAGCCCG
Internal bar code:CTTATGATATAAGGCGCGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5218
LEAP-Seq percent confirming:64.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCATATCGCTGGGACC
Suggested primer 2:TCCCCACCCCATACTACAGG