Insertion junction: CLIP2.000907_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000907
Chromosome:chromosome 16
Location:2677120
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGTGCATGCTTAGTGGGCGTAAAGTTTGGAAAGGGCTTCTTGCATGT
Internal bar code:ACGAGAATTGGCACTAGCCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:50.5494
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:45
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:AAACACAGGAAGGTGCCCAA
Suggested primer 2:AAAAGCAGGCTAGGTGGGTC