Insertion junction: CLIP2.000909_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000909
Chromosome:chromosome 11
Location:791582
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre11.g467633 (1 of 1) PTHR11918//PTHR11918:SF78 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCTTCGGCTGCCAGGTGTGCGCACGCGCGCACACGCGCAATGCTAC
Internal bar code:GTCTGTTTAACTCGGTTTCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCTGAGAGAGGGGGTGG
Suggested primer 2:TCGACTTCCCTTGACCAAGC