Insertion junction: CLIP2.000915_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000915
Chromosome:chromosome 2
Location:5135345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111550 (1 of 1) IPR000104//IPR000719//IPR001229//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Jacalin-like lectin domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGTGTCGACCGTCGCGCCCGACAGACCTGCTACATGAGCCCCGAGG
Internal bar code:GGTCGGTGTACATCCGTTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3296
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCCTCCTGCCCCATAAT
Suggested primer 2:GCTCCTTCCAGTTACACCCC