Insertion junction: CLIP2.000924_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000924
Chromosome:chromosome 17
Location:1363091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706000 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCGTCTAGCCGCCCGATGCGCTCTTGCAGCAGCACCATGGTCGAGT
Internal bar code:ACTTTGCAACACTTTCGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2465
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:167
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:167

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCAAAGGCTTGTGACT
Suggested primer 2:GTATCGGGCTAGGTGGTGTG