Insertion junction: CLIP2.000927_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000927
Chromosome:chromosome 6
Location:5019205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281766 (1 of 77) IPR001623 - DnaJ domain 3'UTR
Cre06.g281800 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCAGGGTTGCACGAGGCGCACAGGACGTGTTTGCAAAGCAAGAAGGT
Internal bar code:TCGACCGTGTGAAGGGCCCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1234
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGCGCACACAATTTCTA
Suggested primer 2:AGAGTTGTGAAGCTGACGGG