Insertion junction: CLIP2.000939_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000939
Chromosome:plastome
Location:205318
Confidence (%):40
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATATAGAATGTTTACATACTAGGCAGTGGCGGTACCACTGCCACTGAC
Internal bar code:TTTCTATATTCGTGCCAAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:217
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:
Suggested primer 2:GTGGCACTGGCTTGAAAGTC