Insertion junction: CLIP2.000942_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000942
Chromosome:chromosome 1
Location:5614860
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040050 TPK1 (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80); Thiamine pyrophosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAGCACGTCTGCCCGGGGCCCGTCCGCCTACCTGGGGCTATCGGCAC
Internal bar code:GCGGTTAGTTGGGGAGGGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:672
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAGACGGGTTAGGCGTA
Suggested primer 2:GACCCAAGAAGTCCGAGCAA