Insertion junction: CLIP2.000946_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000946
Chromosome:chromosome 3
Location:4127590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172700 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCTGTGGCGGCGCAGCAGGGCCGGCTGCAGGGCCAGCAGCAAGGCA
Internal bar code:AGGATTCCACGTGTGTGTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:4098
LEAP-Seq percent confirming:42.3729
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCCGCTCAAACTCAG
Suggested primer 2:GTGTGTCTTGTCCCTCCTCG