Insertion junction: CLIP2.000955_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000955
Chromosome:chromosome 6
Location:5018615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281766 (1 of 77) IPR001623 - DnaJ domain 3'UTR
Cre06.g281800 (1 of 6) PF09353 - Domain of unknown function (DUF1995) (DUF1995) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGCACGCGTGCCGGGATCGCCGAATCCGGCACCGGCAAGGTCAACG
Internal bar code:AACAGCGTCAGTTACACTCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4804
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCCCTATGCATTTTGC
Suggested primer 2:CTTGTTGTGTGCCACCCATG