Insertion junction: CLIP2.000956_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000956
Chromosome:chromosome 8
Location:2594224
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g373100 CYP97C3,CYP25 Cytochrome P450, CYP97 superfamily; (1 of 1) 1.14.99.45 - Carotene epsilon-monooxygenase / LUT1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTGCCTGCCATGCGGTGGACGTGGTCTGCTCCACCGAGCGCCTCCCC
Internal bar code:TTGAGTAGGGGCGGCCAACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:48
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAGGAAACAGGACGGCA
Suggested primer 2:CCCGGCACTTCAAAGTTGTG