Insertion junction: CLIP2.000970_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000970
Chromosome:chromosome 2
Location:1530602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084350 CGLD1,PAM71 (1 of 1) PTHR12608:SF6 - GDT1-LIKE PROTEIN 1, CHLOROPLASTIC; Mn transport across thylakoid membrane intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGAGAAAGAGAAAGAGAGAGGTAACATAGCAAATCAGATACCACAT
Internal bar code:ACGGCCCTCTGGTATCAGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4033
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTGGGTGATTGAGGAGG
Suggested primer 2:AGGCAAGTCAATGGGATGGG