Insertion junction: CLIP2.000974_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000974
Chromosome:chromosome 3
Location:2323001
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGCAATGCTTATGGTTCGATTGGTCAGAGTAGGTAGATGGCTTGCG
Internal bar code:TCGAGACACAACGATGCGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2629
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTACGGCTGCAGATGTAGGG
Suggested primer 2:GTCCTGACGGTGACTTTCGT