Insertion junction: CLIP2.000976_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000976
Chromosome:chromosome 6
Location:2476197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269050 TIC62,YCF39-2 (1 of 2) PTHR14194:SF71 - PRESTALK A DIFFERENTIATION PROTEIN A; Putative dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAGGGGCGTGAGGGCGGAGGTCCTGGGGGGGCGGGCAGGGGCGGCGC
Internal bar code:GGTCCATAATTTTGCTACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAACCCCCAATCCCTTCCTC
Suggested primer 2:CTAGCCGATACACGTGACCC