Insertion junction: CLIP2.000977_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000977
Chromosome:chromosome 16
Location:1066377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATACCCCATTATGTGCTGCTAGTAATCGACGTGCCTATAAAACGCGTTA
Internal bar code:TGGCGGGGGAGTTGCGCTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCGCTGCAATCAACGTA
Suggested primer 2:TGGCTGCAACAGTGACTTCA