Insertion junction: CLIP2.000977_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000977
Chromosome:chromosome 16
Location:1066377
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649433 (1 of 4) IPR000104//IPR001471//IPR016177 - Antifreeze protein, type I // AP2/ERF domain // DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATGCAGCAACCCCATCCAAGTGATAAGCTGGAACATCGTTGCCACGA
Internal bar code:GTCTAGCGCGGCTTCGGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2662
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTGCAACAGTGACTTCA
Suggested primer 2:AGACCGCTGCAATCAACGTA