Insertion junction: CLIP2.000981_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000981
Chromosome:chromosome 13
Location:5260845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g607900 CPLD68 Conserved in the Plant Lineage and Diatoms; (1 of 96) IPR019734 - Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCAATTCATGGGAGGGCTAATCGGATTACCCAGCAACTTCACAGCCC
Internal bar code:GATTGTTCATTGAGCTGTCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2165
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCTCACTCGCCACATA
Suggested primer 2:ATGGAGTAGCCCAGGTACGT