Insertion junction: CLIP2.000990_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000990
Chromosome:chromosome 6
Location:6620707
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294700 DIV152 (1 of 6) PF01477 - PLAT/LH2 domain (PLAT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGCCCAGGGTGAACAGCTGGCAACACACGCGGAGCAGCTGGAGGCGGC
Internal bar code:AAAGGCTTATGTGGATCAGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:208
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGACAGCTCCTGCAAG
Suggested primer 2:TTGCTTCACGGGCTCTAAGG