Insertion junction: CLIP2.000995_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000995
Chromosome:chromosome 11
Location:2170187
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467737 (1 of 1) PTHR18937//PTHR18937:SF160 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAGACCGCTGCACCGCTCCTGCACCCAGCGCCTGGCCGCTGACCTCC
Internal bar code:GTCAAGTTTTCCTAGATCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2555
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACTGCAAGAGCTCACCT
Suggested primer 2:CCGTACACGTGGTTGTCGTA