Insertion junction: CLIP2.000997_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000997
Chromosome:chromosome 1
Location:3083280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019550 ankryin repeat containing protein; (1 of 2) PTHR24128:SF17 - E3 UBIQUITIN-PROTEIN LIGASE XBAT32 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAAACGTAGTGAACGGGCGAGAACAGAGTTCCGAGTTGCGGCGACATGC
Internal bar code:TATCGCGCCGCTAGCTATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1026
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAAGCACTCACTTGCAC
Suggested primer 2:GCGGACCTAGACTTTTGGCT