Insertion junction: CLIP2.000997_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000997
Chromosome:chromosome 1
Location:3083281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g019550 ankryin repeat containing protein; (1 of 2) PTHR24128:SF17 - E3 UBIQUITIN-PROTEIN LIGASE XBAT32 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGTCTGGTCACCTTCCGCACGCACCTGCAGACGCCAGCCTGTCTGA
Internal bar code:TATCGCGCCGCTAGCTATAGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:992
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGACCTAGACTTTTGGCT
Suggested primer 2:CCCAAAGCACTCACTTGCAC