Insertion junction: CLIP2.000998_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000998
Chromosome:chromosome 3
Location:7354333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206550 CPLD2,PGP5 (1 of 2) PTHR18901//PTHR18901:SF9 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // SUBFAMILY NOT NAMED; conserved expressed protein with hydrolase motif intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGGGTGAAAGGGAGTTGCAGATGGGAGGTGTGGAGGCGTGAGAAGGG
Internal bar code:CTCCGCAGCCGGTTTTTGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:23.0769
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGCACCTAACATCCGT
Suggested primer 2:GCATTTTACCATCGGTCCGC