Insertion junction: CLIP2.001002_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001002
Chromosome:chromosome 3
Location:7345165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206600 AAD1 Acetohydroxyacid dehydratase; (1 of 1) 4.2.1.9 - Dihydroxy-acid dehydratase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGCCTTCCCTCACCGCCCTGCAATCCGCCCCTCCCCACTCCTCCCC
Internal bar code:CATGAGGGGCATGCACCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:88
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATAGAGCCGCGACCTGATTG
Suggested primer 2:GATTGGGAAGTTGGGGGAGG