Insertion junction: CLIP2.001004_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001004
Chromosome:chromosome 10
Location:2234118
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433750 PAP1 Class-I Nucleotidyl-transferase 1, nuclear; (1 of 1) K14376 - poly(A) polymerase (PAP) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTCGTTGGACCTTGTTCTTACATCATGTGTATTCGTTTCCACACCA
Internal bar code:TTACGTTCGACTAGGGTTTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3929
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGGCTCGTTTAGTCTTGT
Suggested primer 2:AGACTGAAAGACCTGTGGCG