Insertion junction: CLIP2.001016_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001016
Chromosome:chromosome 10
Location:850295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423500 HMO1,HMOX1 Heme oxygenase; (1 of 1) PTHR35703//PTHR35703:SF2 - FAMILY NOT NAMED // HEME OXYGENASE 4, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGTCGATGTTTTGCTGACGCGCATTCCTCACGCTCCGGGCGCCCGGC
Internal bar code:TGCTTAGCCGAATTACCAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4276
LEAP-Seq percent confirming:97.5207
LEAP-Seq n confirming:118
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:121

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGTGCGCCTGATTTGT
Suggested primer 2:CGTTCCATGTCCTATCGCGA