Insertion junction: CLIP2.001019_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001019
Chromosome:chromosome 16
Location:2921548
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g663450 LCI11B,BST3,LCI11 Bestrophin 3; (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCAGGTGCGCACGTGGACTCCTCTTCGCGCGTGCAGATCACAGTTGG
Internal bar code:GCGCAATTAGAACTGTTGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3039
LEAP-Seq percent confirming:23.6842
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCAACGTGCTGAGAAGG
Suggested primer 2:ATGCATGAGGAGCAGCTTGT