Insertion junction: CLIP2.001020_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001020
Chromosome:chromosome 1
Location:1577510
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g008550 (1 of 2) PTHR24058//PTHR24058:SF23 - DUAL SPECIFICITY PROTEIN KINASE // SERINE/THREONINE KINASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTATCTGGAAGTGGTTGCGGCGAGGGGTCCTGGCCGCAGCCAGAACA
Internal bar code:GCCCTACATATTCGTGAGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:897
LEAP-Seq percent confirming:64.4444
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTATGTGCGGAGGA
Suggested primer 2:CCAGCTTATCCCCTCTCCCT