Insertion junction: CLIP2.001028_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001028
Chromosome:chromosome 1
Location:2833331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g017550 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTCCTGCCGTTCACGTGCCCGCTGCTTCTCACTCTCCTTGCAATACT
Internal bar code:ACTAATATTGAATGCCGCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:5862
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTCATAGAGCTTGCGTCCGA
Suggested primer 2:AAGGGTTTGCTTGGGTGTCA