Insertion junction: CLIP2.001033_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001033
Chromosome:chromosome 17
Location:3216055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721500 GBSS1A,STA2,GBBSI,GBS1 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein; Granule-bound starch synthase IA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGAACAAGGGAATTCATGCACAAACGTGGGCTAGCATCCTCTGGCCT
Internal bar code:GTGTGGGGGTGGAGAGTCTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1508
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGTTCAGAGACACGCA
Suggested primer 2:GGTACGCAACCTGAACCTCA