Insertion junction: CLIP2.001035_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001035
Chromosome:chromosome 10
Location:3888690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446350 CGLD14 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR31407//PTHR31407:SF17 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTATGTCGCGCGGCGGTGCCCGCATGCATGTTGCAAGTTGGTCCACGGG
Internal bar code:CCTTTTGGTATTGCTTGGCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:973
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGCACAATTCCCATGA
Suggested primer 2:ACCATGGAGCGATGATCGTC