Insertion junction: CLIP2.001050_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001050
Chromosome:chromosome 13
Location:927008
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567950 STA1,AGP1 ADP-glucose pyrophosphorylase large subunit; (1 of 1) PTHR22572:SF119 - GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCTACAACTACACAGCATTGTAAGATTAGCACATGCTGCTGCAAGT
Internal bar code:ACTCTCTGTAAATGCTTTAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:5477
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTGCGACGAGTTGTTT
Suggested primer 2:GTGTGTTTCGCCATGGAACC