Insertion junction: CLIP2.001056_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001056
Chromosome:chromosome 9
Location:3178972
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394473 LCI9 Low-CO2-inducible protein; (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGACCACAAAACACCGCACGGCGCGCACCGGCGTCGGTGAATTGTGT
Internal bar code:GGTAGCTGTGGGTTACTACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3898
LEAP-Seq percent confirming:78.1818
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGATTCCCAGGCAGCTT
Suggested primer 2:GGTTCAGTTGTTGCGGTGTC