Insertion junction: CLIP2.001057_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001057
Chromosome:chromosome 3
Location:5896563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188700 PLP6,PLAP6 Plastid lipid associated protein 6; (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGAACCCAATGGGGGGGACGCCGCTGGCCACGCTCACACTCGGGGGC
Internal bar code:AATCACGTTGATTTACAACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1609
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCGTTATGCTTACGCC
Suggested primer 2:TCTGTCGCTTCCATGCCTTT