Insertion junction: CLIP2.001061_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001061
Chromosome:chromosome 1
Location:5612467
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040050 TPK1 (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80); Thiamine pyrophosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGGTGGGCGCGTTGGAGGTGGCAGTGGGAGCGTTAGAGGAGGTGGCAG
Internal bar code:CTGGGCCCGTTTTCAGAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1572
LEAP-Seq percent confirming:71.0526
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TCTAGCCATCACACTCGGGA
Suggested primer 2:TGCAGTGCAACGATGAGAGT