Insertion junction: CLIP2.001067_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001067
Chromosome:chromosome 10
Location:2228827
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433750 PAP1 Class-I Nucleotidyl-transferase 1, nuclear; (1 of 1) K14376 - poly(A) polymerase (PAP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGCAGCAAAAGAGATAGAGAAGGAGAGCCGCACAGGTGCGCGCTCCC
Internal bar code:CTGGCTCAGTCTTAGGCTACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1586
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGAATATGCATTGCGGC
Suggested primer 2:TGCACGCCCTTGTACTGTAG