Insertion junction: CLIP2.001071_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001071
Chromosome:chromosome 1
Location:5614523
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040050 TPK1 (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80); Thiamine pyrophosphokinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCACATTACCAACACCAGCTGCAGGCCCCCCGCCGGCAGCGACGCCCC
Internal bar code:TGATATAAAATCATATTTAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1276
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CACACCTCCAACCTCCTCAC
Suggested primer 2:TCAGAGACGGGTTAGGCGTA