Insertion junction: CLIP2.001074_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001074
Chromosome:chromosome 12
Location:1694800
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486300 PSAL,PSAL1 (1 of 1) K02699 - photosystem I subunit XI (psaL); Photosystem I reaction center subunit L 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAGAGATGTATATTGAACCCGGTGGCCAAGTAATTGGCGAATATTCA
Internal bar code:ATCAAGCGCTTCGTTTGCGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGCTTCCCTTACTTCGC
Suggested primer 2:TCCCCGTTTCTCTTTCCTGC