Insertion junction: CLIP2.001076_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001076
Chromosome:chromosome 16
Location:415900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g693500 FAP40,ISG1,ISG-C1 Hydroxyproline-rich Flagellar Associated Protein 40; (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGATCGGTGAACATTGCTTTGCCATCGCTGGGTAAGACATTAGCGTC
Internal bar code:ACACGAACGATGGAGGTCAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1269
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCGTAGATAAGGCCCGC
Suggested primer 2:GCCTGGTCCGTCAAGTAACA