Insertion junction: CLIP2.001082_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001082
Chromosome:chromosome 7
Location:4245160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g341850 TIF2,INFB,IF2,EIF2,CIF2 Chloroplast translation initiation factor 2; (1 of 1) PTHR23115//PTHR23115:SF138 - TRANSLATION FACTOR // TRANSLATION INITIATION FACTOR IF-2, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTCTCCAGCACCGCCTTACCCGCCATGCCTCAGCCAGTGCAACCCT
Internal bar code:AGATAGGCCAAAATGGAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:771
LEAP-Seq percent confirming:64.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGGGTCAGATCAGTGT
Suggested primer 2:TTTGAAACCGCTTCAGCAGC