Insertion junction: CLIP2.001088_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001088
Chromosome:chromosome 12
Location:1693741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486300 PSAL,PSAL1 (1 of 1) K02699 - photosystem I subunit XI (psaL); Photosystem I reaction center subunit L intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAATTGGTCGGAGGATTGGACAGGCGTGCCCGCCGTGAAGGCGCATGCT
Internal bar code:GTTAATGGGGACTCTACGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:802
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTTGTAGGAGGGGGAG
Suggested primer 2:CCACCTACCTGAGCAACCTG