Insertion junction: CLIP2.001091_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001091
Chromosome:chromosome 1
Location:2606659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCATGAAGCAGGGGCAGGACTGTTATGTACCACCGTGCGTGCAGGAG
Internal bar code:TCGTGGTGCTTGATTGTCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3614
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGAAACGGAAGCGTACT
Suggested primer 2:GCCTTGAATTGGGCGTGAAG