Insertion junction: CLIP2.001098_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001098
Chromosome:chromosome 1
Location:878144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g005001 CPLD9 Conserved in the Plant Lineage and Diatoms intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGAGCCACGAGGACACTTAAACAATTACGGACATTTGGATTCCTCA
Internal bar code:TGAACTAAAGTTGGAATGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1244
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGAGGGGTACAACTGGG
Suggested primer 2:AGCCCCTGACATTGCTCTTC