Insertion junction: CLIP2.001098_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001098
Chromosome:chromosome 7
Location:3234855
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334150 (1 of 1) PTHR23097//PTHR23097:SF124 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGACTGCCAGACTGCAGTCAGATACCTCTCGCTTGTGCTCCTATACGTG
Internal bar code:GCCGATGTGCGTACGTTTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:4736
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:123
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACAACACGTCTGCAAT
Suggested primer 2:TGCTGCGTTTGTTGTACGTG