Insertion junction: CLIP2.001110_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001110
Chromosome:chromosome 10
Location:2450850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435450 CPL2 (1 of 9) PTHR10071 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR; transcription factor-like protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGGCGGCAGCGACATGCCCGAGAACGCGGCCGCGGAGGTGCAGCAGC
Internal bar code:GGGTTATACAACGAGAACTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3898
LEAP-Seq percent confirming:59.375
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCATCGTCATCCTCGTCG
Suggested primer 2:AGAACCTAAGGATGCGGCTG