Insertion junction: CLIP2.001116_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001116
Chromosome:chromosome 3
Location:175920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144064 (1 of 24) IPR001478 - PDZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGGTGAGTGGAGGGGCAGGGTAGGGACTGGGGGCAGGGCGGCGGTCGA
Internal bar code:AATAATCTCCACTACGTGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2230
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACTGCCTCATTGCCTCA
Suggested primer 2:GTGCCTCACAGCAGTCAGAT