Insertion junction: CLIP2.001121_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001121
Chromosome:chromosome 16
Location:3073617
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664350 CLD1 (1 of 1) PTHR10992//PTHR10992:SF752 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // ALPHA/BETA-HYDROLASE-LIKE PROTEIN; Putative Chlorophyll dephytylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAATGTGTGACGTCCGTGCAGTCTGACGGACCGTCTGACGGCTAACTG
Internal bar code:ACTCGTGATTTCTGTGTGTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3302
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCGAATGCAAGCGTTAG
Suggested primer 2:CAAGCCTGCATCGCATACAC