Insertion junction: CLIP2.001129_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001129
Chromosome:chromosome 3
Location:1858352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154500 (1 of 1) PF03164 - Trafficking protein Mon1 (Mon1) 3'UTR
Cre03.g154550 PCR1,P5CR1 Pyrroline-5-carboxylate reductase; (1 of 1) 1.5.1.2 - Pyrroline-5-carboxylate reductase / P5CR 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTATAAGCTATAAGCAGGGGCGTGCGTGGTGTGGTGTGATAGTTCCT
Internal bar code:GGTGTTAGGTAAAAGGAAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGAACATATACCGCTGGCCT
Suggested primer 2:CCCTCAAGGACATGGTCACC